The engine sucked water through the intake and could be hydro-locked. You'll have to remove all of the spark plugs and crank the engine with them removed in order to get the water out of the cylinders. Water doesn't compress so don't try to crank it over with it in the cylinders. I would disconnect the fuel pump fuse so that fuel won't be injected as you crank the engine over. Water if there is any in the cylinders will shoot out the spark plug holes.Your distributer depending on the vehicle might have got wet, remove the cap and dry it out as well as your intake. Just buy a new air filter they are inexpensive anyway.
Change the oil and oil filter as well and try to start it up once reassembled.
Change the oil and oil filter as well and try to start it up once reassembled.